ChIP-Atlas: SRX207544

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Unclassified
Antigen: Unclassified

Cell type

Cell type Class: Gonad
Cell type: Round spermatids
NA: NA

Attributes by original data submitter

Sample

source_name: Round spermatids
tissue: Round spermatids
strain: C57BL/6
antibody: Van Der Heijden et al. Nature Genetics, 2007, pubmed ID:17237782

Sequenced DNA Library

library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads: 230237668
Reads aligned (%): 92.4
Duplicates removed (%): 21.6
Number of peaks: 511 (qval < 1E-05)

mm9

Number of total reads: 230237668
Reads aligned (%): 92.2
Duplicates removed (%): 21.5
Number of peaks: 591 (qval < 1E-05)

Base call quality data from DBCLS SRA