SRX207535
GSM1046830: Sperm H3.1/H3.2 replicate1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Gonad
Cell type
Sperm
NA
NA

Attributes by original data submitter

Sample

source_name
Sperm
tissue
Sperm
strain
C57BL/6
antibody
Van Der Heijden et al. Nature Genetics, 2007, pubmed ID:17237782

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
209834607
Reads aligned (%)
95.4
Duplicates removed (%)
21.5
Number of peaks
482 (qval < 1E-05)

mm9

Number of total reads
209834607
Reads aligned (%)
95.2
Duplicates removed (%)
21.5
Number of peaks
544 (qval < 1E-05)

Base call quality data from DBCLS SRA