SRX206369
GSM1038263: Med1 Pro Bcell ChipSeq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Med1

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
pro-B cell
strain
C57BL/6-129
chip antibody
Med1/TRAP220 (Bethyl, Catalog No.A300-793A)
cell type
38B9 cells

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
34184251
Reads aligned (%)
87.0
Duplicates removed (%)
49.6
Number of peaks
14303 (qval < 1E-05)

mm9

Number of total reads
34184251
Reads aligned (%)
86.9
Duplicates removed (%)
49.7
Number of peaks
14248 (qval < 1E-05)

Base call quality data from DBCLS SRA