Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Embryo
Cell type
Hindlimb
MeSH Description
Either of two extremities of four-footed non-primate land animals. It usually consists of a FEMUR; TIBIA; and FIBULA; tarsals; METATARSALS; and TOES. (From Storer et al., General Zoology, 6th ed, p73)

Attributes by original data submitter

Sample

source_name
mouse_E13.5_HL
developmental stage
gestational day E13.5
tissue
hindlimb autopod
chip antibody
H3K27ac
chip antibody vendor
Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
55733155
Reads aligned (%)
99.0
Duplicates removed (%)
11.5
Number of peaks
3889 (qval < 1E-05)

mm9

Number of total reads
55733155
Reads aligned (%)
98.8
Duplicates removed (%)
11.4
Number of peaks
3862 (qval < 1E-05)

Base call quality data from DBCLS SRA