Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMAD3

Cell type

Cell type Class
Neural
Cell type
BT67
NA
NA

Attributes by original data submitter

Sample

source_name
BT67
cell line
BT67
cell type
Brain tumour stem cell
chip antibodies
SMAD3 (abcam, cat#ab40854)
geo_loc_name
missing
collection_date
missing

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
29321612
Reads aligned (%)
94.6
Duplicates removed (%)
6.5
Number of peaks
19433 (qval < 1E-05)

hg19

Number of total reads
29321612
Reads aligned (%)
94.0
Duplicates removed (%)
6.7
Number of peaks
18991 (qval < 1E-05)

Base call quality data from DBCLS SRA