SRX205096
GSM1038465: H3R17me2asym-a549-3d-control; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3R17me2

Cell type

Cell type Class
Lung
Cell type
A549
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
a549 3D culture
cell line
A549
chip antibody
H3R17me2asym
chip antibody vendor
Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
25402237
Reads aligned (%)
94.3
Duplicates removed (%)
9.0
Number of peaks
870 (qval < 1E-05)

hg19

Number of total reads
25402237
Reads aligned (%)
93.7
Duplicates removed (%)
9.7
Number of peaks
1116 (qval < 1E-05)

Base call quality data from DBCLS SRA