SRX204661
GSM1037510: O-GlcNAc ChIP-Seq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
H293T
cell line
H293T
chip antibody
O-GlcNAc
chip antibody vendor
Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiScanSQ

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
37323865
Reads aligned (%)
93.7
Duplicates removed (%)
14.2
Number of peaks
3475 (qval < 1E-05)

hg19

Number of total reads
37323865
Reads aligned (%)
93.0
Duplicates removed (%)
15.6
Number of peaks
3461 (qval < 1E-05)

Base call quality data from DBCLS SRA