SRX204655
GSM1037498: Input DNA ESC2 wt ES C57; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
ES cell
cell type
mouse ES cell
passages
15-25
strain
pure C57 background
antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
33362740
Reads aligned (%)
97.8
Duplicates removed (%)
9.8
Number of peaks
422 (qval < 1E-05)

mm9

Number of total reads
33362740
Reads aligned (%)
97.6
Duplicates removed (%)
9.8
Number of peaks
419 (qval < 1E-05)

Base call quality data from DBCLS SRA