SRX204415
GSM1036408: WCE P493-6 No Tet; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
None
antibody catalog number
None WCE
cell type
P493-6
c-myc level
steady state

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
37672510
Reads aligned (%)
92.1
Duplicates removed (%)
7.1
Number of peaks
935 (qval < 1E-05)

hg19

Number of total reads
37672510
Reads aligned (%)
91.0
Duplicates removed (%)
8.5
Number of peaks
1086 (qval < 1E-05)

Base call quality data from DBCLS SRA