Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

CD3+

NA

NA

Sample

MOLECULE

genomic DNA

DISEASE

None

BIOMATERIAL_PROVIDER

FHCRC HEIMFELD

BIOMATERIAL_TYPE

Primary Cell

CELL_TYPE

CD3 Primary Cells

MARKERS

CD3+

DONOR_ID

RO 01679

DONOR_AGE

year 21

DONOR_HEALTH_STATUS

NA

DONOR_SEX

male

DONOR_ETHNICITY

Caucasian

PASSAGE_IF_EXPANDED

NA

sample_term_id

CL_0000084

Sequenced DNA Library

library_name

DGF.DS17198

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

635018815

Reads aligned (%)

64.2

Duplicates removed (%)

51.5

Number of peaks

104594 (qval < 1E-05)

hg19

Number of total reads

635018815

Reads aligned (%)

63.9

Duplicates removed (%)

52.5

Number of peaks

103280 (qval < 1E-05)