Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BATF

Cell type

Cell type Class
Blood
Cell type
T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Blood
individual
donor 1
tissue
Blood
cell line
Primary cells
cell type
T cells
genotype
BATF-TFAP4 knockin
treatment
None
chip antibody
BATF
geo_loc_name
missing
collection_date
missing

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
23618509
Reads aligned (%)
54.4
Duplicates removed (%)
16.1
Number of peaks
33807 (qval < 1E-05)

hg19

Number of total reads
23618509
Reads aligned (%)
54.3
Duplicates removed (%)
16.2
Number of peaks
33782 (qval < 1E-05)

Base call quality data from DBCLS SRA