Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
UBE2I

Cell type

Cell type Class
Lung
Cell type
WI-38
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
ras_Ubc9_ChIPSeq
cell line
WI38
cell type
primary fibroblasts
status
Ras induced senescent
genotype/variation
infected with pBABE-puro-H-RasG12V
chip antibodies
(BD transduction)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
35933877
Reads aligned (%)
55.6
Duplicates removed (%)
34.1
Number of peaks
1534 (qval < 1E-05)

hg38

Number of total reads
35933877
Reads aligned (%)
57.4
Duplicates removed (%)
32.5
Number of peaks
1444 (qval < 1E-05)

Base call quality data from DBCLS SRA