SRX204134
GSM1035380: mouse ts h3k27ac; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Placenta
Cell type
Trophoblast stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
Trophoblast stem cells
strain
129/Sv
chip antibody
H3K27ac (Abcam, ab4729, lot 730178)
cell type
Trophoblast stem cells

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
32011924
Reads aligned (%)
89.4
Duplicates removed (%)
40.2
Number of peaks
8095 (qval < 1E-05)

mm9

Number of total reads
32011924
Reads aligned (%)
89.2
Duplicates removed (%)
40.3
Number of peaks
8184 (qval < 1E-05)

Base call quality data from DBCLS SRA