Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Digestive tract

Cell type

HCT 116

Primary Tissue

Colon

Tissue Diagnosis

Carcinoma

Sample

source_name

colorectal carcinoma

cell line

HCT116

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

High-throughput sequencing libraries were constructed from ChIRPed DNA with KAPA Hyper Prep Kit (Illumina) according to manufacturer’s instruction and sequenced on HiSeq 2500 System (Illumina) with paired-end 101 bp.

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

32720345

Reads aligned (%)

67.1

Duplicates removed (%)

56.3

Number of peaks

58787 (qval < 1E-05)

hg19

Number of total reads

32720345

Reads aligned (%)

66.4

Duplicates removed (%)

57.3

Number of peaks

61263 (qval < 1E-05)