Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Plasma Cells

MeSH Description

Specialized forms of antibody-producing B-LYMPHOCYTES. They synthesize and secrete immunoglobulin. They are found only in lymphoid organs and at sites of immune responses and normally do not circulate in the blood or lymph. (Rosen et al., Dictionary of Immunology, 1989, p169 & Abbas et al., Cellular and Molecular Immunology, 2d ed, p20)

Sample

source_name

Whole cell extract from MM.1S cells (500 nM JQ1)

diagnosis

Multiple myeloma

chip antibody

None WCE

antibody catalog number

--

cell type

Plasma cell

treatment duration

--

treatment concentration

--

treatment drug

--

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

39153422

Reads aligned (%)

95.3

Duplicates removed (%)

3.5

Number of peaks

918 (qval < 1E-05)

hg19

Number of total reads

39153422

Reads aligned (%)

94.5

Duplicates removed (%)

4.2

Number of peaks

1010 (qval < 1E-05)