Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Pluripotent stem cell

Cell type

Embryoid Bodies

MeSH Description

Spontaneous aggregations of human embryonic stem cells that occur in vitro after culturing in a medium that lacks LEUKEMIC INHIBITORY FACTOR. The embryoid bodies can further differentiate into cells that represent different lineages.

Sample

source_name

Neuralized embryoid bodies

treatment

all trans retinoic acid (RA) and SAG for 3 days before harvested

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

mm10

Number of total reads

75654143

Reads aligned (%)

88.1

Duplicates removed (%)

60.0

Number of peaks

5048 (qval < 1E-05)

mm9

Number of total reads

75654143

Reads aligned (%)

87.9

Duplicates removed (%)

60.1

Number of peaks

4932 (qval < 1E-05)