SRX203319
GSM1032064: T6 [Bisulfite-Seq]; Homo sapiens; Bisulfite-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Bisulfite-Seq
Antigen
Bisulfite-Seq

Cell type

Cell type Class
Placenta
Cell type
Chorinic villus
NA
NA

Attributes by original data submitter

Sample

source_name
Second trimester CVS
tissue
CVS tissue
genetic variation
Trisomy 21

Sequenced DNA Library

library_strategy
Bisulfite-Seq
library_source
GENOMIC
library_selection
RANDOM

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
42674695
Reads aligned (%)
45.8
Coverage rate (×)
1.2
Number of hyper MRs
63160 (qval < 1E-05)

hg19

Number of total reads
42674695
Reads aligned (%)
46.1
Coverage rate (×)
1.4
Number of hyper MRs
65820 (qval < 1E-05)

Base call quality data from DBCLS SRA