Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Thymocytes

MeSH Description

HEMATOPOIETIC PROGENITOR CELLS that have migrated to the THYMUS where they differentiate into T-LYMPHOCYTES. Thymocytes are classified into maturational stages based on the expression of CELL SURFACE ANTIGENS.

Sample

source_name

Thymocytes

strain

C57BL/6

age

4 weeks

tissue

thymus

cell type

Thymocytes

genome/variation

wild-type

antibody

input chromatin

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

55304190

Reads aligned (%)

98.7

Duplicates removed (%)

32.9

Number of peaks

324 (qval < 1E-05)

mm9

Number of total reads

55304190

Reads aligned (%)

98.5

Duplicates removed (%)

32.9

Number of peaks

331 (qval < 1E-05)