SRX203129
GSM1032373: H3K27me3 gdCCR6p ChIPSeq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Gamma delta T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD27-CCR6+ gd T cells
cell type
primary cells (Lymph node and spleen)
protocol
ex vivo
strain
C57BL/6
antibody
H3K27me3 (Millipore, 07-449)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37632005
Reads aligned (%)
87.9
Duplicates removed (%)
60.4
Number of peaks
508 (qval < 1E-05)

mm9

Number of total reads
37632005
Reads aligned (%)
87.8
Duplicates removed (%)
60.5
Number of peaks
530 (qval < 1E-05)

Base call quality data from DBCLS SRA