SRX201901
GSM1027429: tj-GAL4>RNAi tej rep1; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

source_name
tj-GAL4>RNAi tej
genotype/variation
tj-Gal4>RNAi tej
Stage
from 5-6 days old flies
tissue/cell type
ovaries
molecule subtype
Rpb3-bound DNA
chip antibody
antiRpb3
chip antibody information
gift of Karen Adelman; Adelman et al. Mol Cell 2005

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
38178192
Reads aligned (%)
90.4
Duplicates removed (%)
79.6
Number of peaks
7463 (qval < 1E-05)

dm3

Number of total reads
38178192
Reads aligned (%)
90.5
Duplicates removed (%)
79.0
Number of peaks
7581 (qval < 1E-05)

Base call quality data from DBCLS SRA