Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Neutrophil progenitors
NA
NA

Attributes by original data submitter

Sample

source_name
neutrophil progenitor cells
cell type
human cord blood CD34+ cell-derived neutrophil progenitor cells
exposure conditions
no exposure
time of differentiation and exposure
5 days
differentiation
100 ng/ml G-CSF
chip antibody
H3K27me3 (Millipore, 07-499, lot: JBC1924326)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
52621718
Reads aligned (%)
94.8
Duplicates removed (%)
22.5
Number of peaks
20376 (qval < 1E-05)

hg19

Number of total reads
52621718
Reads aligned (%)
93.9
Duplicates removed (%)
24.3
Number of peaks
20044 (qval < 1E-05)

Base call quality data from DBCLS SRA