Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me2

Cell type

Cell type Class
Digestive tract
Cell type
MGC-803
NA
NA

Attributes by original data submitter

Sample

source_name
gastric cancer cells
Sex
male
tissue
stomach
cell line
MGC803 gastric cancer cell line
age
53
genotype/variation
control
chip antibody
anti-H3K4me2 (Abcam, catalog# ab32356, lot# GR26908-7)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
20248138
Reads aligned (%)
98.3
Duplicates removed (%)
4.4
Number of peaks
922 (qval < 1E-05)

hg19

Number of total reads
20248138
Reads aligned (%)
97.5
Duplicates removed (%)
4.8
Number of peaks
470 (qval < 1E-05)

Base call quality data from DBCLS SRA