Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BRD4

Cell type

Cell type Class
Blood
Cell type
Mutu
NA
NA

Attributes by original data submitter

Sample

source_name
MutuI (EBV+ Burkitt lymphoma cell line)
cell line
MutuI
pathogen
Epstein-Barr virus
chip antibody
BRD4

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA was prepared and ChIP performed as described in the paper ChIP-seq libraries were prepared as described in the paper

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
159465007
Reads aligned (%)
64.2
Duplicates removed (%)
32.0
Number of peaks
2199 (qval < 1E-05)

hg38

Number of total reads
159465007
Reads aligned (%)
66.6
Duplicates removed (%)
30.3
Number of peaks
2302 (qval < 1E-05)

Base call quality data from DBCLS SRA