Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

A20

Tissue

Blood

Lineage

cellLine

Description

B cell lymphoma line derived from a spontaneous reticulum cell neoplasm

Sample

source_name

A20

biomaterial_provider

ATCC

lab

UW-m

lab description

Stamatoyannopoulous - University of Washington

datatype

DnaseSeq

datatype description

DNaseI HS Sequencing

cell

A20

cell organism

mouse

cell description

B cell lymphoma line derived from a spontaneous reticulum cell neoplasm

cell sex

M

age

immortalized

age description

Immortal cells

strain

BALB/cAnN

strain description

ccMyeloma high incidence H2d

age

immortalized

age description

Immortal cells

labversion

1,Hotspot-v5.1,lmax-v1.1,WindowDensity-bin20-win+/-75

replicate

1,2

strain description

ccMyeloma high incidence H2d

Sequenced DNA Library

library_name

GSM1014167: UW_DnaseSeq_A20_immortalized_BALB/cAnN

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer

mm10

Number of total reads

88274198

Reads aligned (%)

96.6

Duplicates removed (%)

25.1

Number of peaks

60266 (qval < 1E-05)

mm9

Number of total reads

88274198

Reads aligned (%)

96.5

Duplicates removed (%)

25.1

Number of peaks

60290 (qval < 1E-05)