Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Cardiovascular

Cell type

Heart

MeSH Description

The hollow, muscular organ that maintains the circulation of the blood.

Sample

source_name

Heart

biomaterial_provider

1)LICR lab; 2)CSHL lab

lab

UW-m

lab description

Stamatoyannopoulous - University of Washington

datatype

DnaseSeq

datatype description

DNaseI HS Sequencing

cell

Heart

cell organism

mouse

cell description

Heart

cell sex

M

age

adult-8wks

age description

Adult 8 weeks

strain

C57BL/6

strain description

C57 black 6, the most common inbred strain of laboratory mouse

age

adult-8wks

age description

Adult 8 weeks

labexpid

DS18138

labversion

1,Hotspot-v5.2,Hotspot-v5.1,lmax-v1.1,WindowDensity-bin20-win+/-75

replicate

1,2

strain description

C57 black 6, the most common inbred strain of laboratory mouse

Sequenced DNA Library

library_name

GSM1014166: UW_DnaseSeq_Heart_adult-8wks_C57BL/6

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer

mm10

Number of total reads

122019042

Reads aligned (%)

94.6

Duplicates removed (%)

30.0

Number of peaks

106445 (qval < 1E-05)

mm9

Number of total reads

122019042

Reads aligned (%)

94.5

Duplicates removed (%)

30.0

Number of peaks

106518 (qval < 1E-05)