Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Pancreas

Cell type

Pancreas

MeSH Description

A nodular organ in the ABDOMEN that contains a mixture of ENDOCRINE GLANDS and EXOCRINE GLANDS. The small endocrine portion consists of the ISLETS OF LANGERHANS secreting a number of hormones into the blood stream. The large exocrine portion (EXOCRINE PANCREAS) is a compound acinar gland that secretes several digestive enzymes into the pancreatic ductal system that empties into the DUODENUM.

Sample

MOLECULE

genomic DNA

DISEASE

iron deficiency, bipolar

BIOMATERIAL_PROVIDER

Shin Lin, Stanford University

BIOMATERIAL_TYPE

Primary Tissue

TISSUE_TYPE

Pancreas

TISSUE_DEPOT

N/A

COLLECTION_METHOD

Autopsy

DONOR_ID

STL002

DONOR_AGE

30

DONOR_HEALTH_STATUS

iron deficiency, bipolar disease (NO diabetes, hypertension, coronary artery disease, cancer)

DONOR_SEX

Female

DONOR_ETHNICITY

Caucasian

sample_term_id

UBERON_0001264

Sequenced DNA Library

library_name

CY79

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

43122771

Reads aligned (%)

93.7

Duplicates removed (%)

27.9

Number of peaks

2726 (qval < 1E-05)

hg19

Number of total reads

43122771

Reads aligned (%)

92.6

Duplicates removed (%)

30.6

Number of peaks

2507 (qval < 1E-05)