SRX190464
GSM1012188: H32 N31 EGFP OK flag 2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Pluripotent stem cell
Cell type
mESC derived neural cells
NA
NA

Attributes by original data submitter

Sample

source_name
Neural progenitor like cells
cell type
ES-derived neural progenitor like cells
passages
15-18
strain
129/SvJ
chip antibody
Monoclonal ANTI-FLAG M2, Clone M2 (SIGMA, F1804)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
47080829
Reads aligned (%)
85.2
Duplicates removed (%)
41.2
Number of peaks
14424 (qval < 1E-05)

mm9

Number of total reads
47080829
Reads aligned (%)
85.1
Duplicates removed (%)
41.2
Number of peaks
14381 (qval < 1E-05)

Base call quality data from DBCLS SRA