Antigen

Antigen Class

TFs and others

Antigen

EP300

Cell type

Cell type Class

Uterus

Cell type

ECC-1

Primary Tissue

Uterus

Tissue Diagnosis

Adenocarcinoma

Sample

GEO Accession

GSM1010759

antibody antibodydescription

Rabbit Polyclonal. Antibody Target: P300

antibody targetdescription

EP300(c-20)

antibody vendorid

sc-585

antibody vendorname

Santa Cruz Biotechnology

antibody

p300

cell description

epithelial cell line derived from an endometrium adenocarcinoma, fetal membranes were collected from women who underwent planned cesarean delivery at term, before labor and without rupture of membranes

cell karyotype

cancer

cell lineage

endoderm

cell organism

human

cell sex

F

cell

ECC-1

controlid

SL16754,SL13506

datatype description

Chromatin IP Sequencing

datatype

ChipSeq

lab description

Myers - Hudson Alpha Institute for Biotechnology

lab

HudsonAlpha

labexpid

SL14585,SL13274

protocol description

Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

protocol

v042211.1

replicate

1,2

softwareversion

MACS

treatment description

No special treatment or protocol applies

treatment

None

Sequenced DNA Library

library_name

GSM1010759: HudsonAlpha_ChipSeq_ECC-1_p300_v042211.1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

56807631

Reads aligned (%)

91.7

Duplicates removed (%)

5.8

Number of peaks

27191 (qval < 1E-05)

hg19

Number of total reads

56807631

Reads aligned (%)

91.2

Duplicates removed (%)

6.6

Number of peaks

27071 (qval < 1E-05)