ChIP-Atlas: SRX190190

Antigen

GEO Accession: GSM1010734
antibody antibodydescription: Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF
antibody targetdescription: This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)
antibody vendorid: sc-5916
antibody vendorname: Santa Cruz Biotechnology
antibody: CTCF_(SC-5916)
cell description: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis
cell karyotype: cancer
cell lineage: ectoderm
cell organism: human
cell sex: F
cell: MCF-7
controlid: SL16757,SL13504
datatype description: Chromatin IP Sequencing
datatype: ChipSeq
lab description: Myers - Hudson Alpha Institute for Biotechnology
lab: HudsonAlpha
labexpid: SL13463,SL16333
protocol description: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)
protocol: v042211.1
replicate: 1,2
softwareversion: MACS
treatment description: No special treatment or protocol applies
treatment: None

library_name: GSM1010734: HudsonAlpha_ChipSeq_MCF-7_CTCF_(SC-5916)_v042211.1
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP
library_construction_protocol: Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs