Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Cardiovascular

Cell type

HCF

Tissue

heart

Lineage

mesoderm

Description

cardiac fibroblasts

Sample

source_name

HCF

biomaterial_provider

ScienCell

lab

UW

lab description

Stamatoyannopoulous - University of Washington

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

HCF

cell organism

human

cell description

cardiac fibroblasts

cell karyotype

normal

cell lineage

mesoderm

cell sex

U

antibody

Input

antibody description

Control signal which may be subtracted from experimental raw signal before peaks are called.

treatment

None

treatment description

No special treatment or protocol applies

control

std

control description

Standard input signal for most experiments.

controlid

wgEncodeEH000942

labexpid

DS15914

labversion

Bowtie 0.12.7

replicate

1

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

32717489

Reads aligned (%)

98.8

Duplicates removed (%)

2.4

Number of peaks

1149 (qval < 1E-05)

hg19

Number of total reads

32717489

Reads aligned (%)

97.7

Duplicates removed (%)

4.0

Number of peaks

1248 (qval < 1E-05)