Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Primary Human Umbilical Vein Endothelial Cells
cell type
Primary Human Umbilical Vein Endothelial Cells
passages
P3-6
treatment
VEGF
time
4h
chip antibody
p300
chip antibody manufactuer
Santa Cruz

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
37454775
Reads aligned (%)
54.3
Duplicates removed (%)
38.7
Number of peaks
2473 (qval < 1E-05)

hg38

Number of total reads
37454775
Reads aligned (%)
56.5
Duplicates removed (%)
36.9
Number of peaks
2518 (qval < 1E-05)

Base call quality data from DBCLS SRA