SRX1897213
BS-sequencing of MLP-WT mouse whole heart

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Bisulfite-Seq
Antigen
Bisulfite-Seq

Cell type

Cell type Class
Cardiovascular
Cell type
Heart
MeSH Description
The hollow, muscular organ that maintains the circulation of the blood.

Attributes by original data submitter

Sample

strain
B6n_1
isolate
MLP-WT 1
age
12 weeks
sex
female
tissue
Whole heart
biomaterial_provider
Prof .Ralph Knöll, Karolinska Instutet, ICMC

Sequenced DNA Library

library_name
102717-001-007
library_strategy
Bisulfite-Seq
library_source
GENOMIC
library_selection
RANDOM

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
377737846
Reads aligned (%)
92.0
Coverage rate (×)
11.9
Number of hyper MRs
243329 (qval < 1E-05)

mm9

Number of total reads
377737846
Reads aligned (%)
92.1
Coverage rate (×)
12.0
Number of hyper MRs
242956 (qval < 1E-05)

Base call quality data from DBCLS SRA