Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Lung
Cell type
WI-38
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
WI-38 cell culture
cell type
hTERT-immortalized WI-38 primary human lung fibroblasts
cell line
WI-38
antibody
H3K27me3
antibody manufacturer
Millipore
passage
67

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
42741337
Reads aligned (%)
58.1
Duplicates removed (%)
41.1
Number of peaks
730 (qval < 1E-05)

hg19

Number of total reads
42741337
Reads aligned (%)
57.9
Duplicates removed (%)
41.6
Number of peaks
854 (qval < 1E-05)

Base call quality data from DBCLS SRA