SRX189074
GSM1007988: ChIP seq H3K27me3 19; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Lung
Cell type
WI-38
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
WI-38 cell culture
cell type
WI-38 primary human lung fibroblasts
cell line
WI-38
antibody
H3K27me3
antibody manufacturer
Millipore
passage
19

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
28711256
Reads aligned (%)
65.5
Duplicates removed (%)
7.5
Number of peaks
387 (qval < 1E-05)

hg19

Number of total reads
28711256
Reads aligned (%)
65.0
Duplicates removed (%)
8.4
Number of peaks
346 (qval < 1E-05)

Base call quality data from DBCLS SRA