Antigen

Antigen Class

TFs and others

Antigen

Nr1d1

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

liver

strain

C57B/6

age

12 weeks old male

genotype/variation

WT

Sex

male

antibody

Rev-erba, Cell Signaling Technology (CST#2124)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

DNA or RNA is extracted using Qiagen kits Library contruction follows illumina kits Standard illumina method was used

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

21889695

Reads aligned (%)

96.2

Duplicates removed (%)

18.0

Number of peaks

26749 (qval < 1E-05)

mm9

Number of total reads

21889695

Reads aligned (%)

96.0

Duplicates removed (%)

18.1

Number of peaks

26757 (qval < 1E-05)