GSM2218584: PPARg ChIP-seq brown adipocytes day0 rep1; Mus musculus; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Pparg
Cell type
Cell type Class
Adipocyte
Cell type
Brown adipocytes
NA
NA
Attributes by original data submitter
Sample
source_name
immortalized brown adipocytes
strain
N/A
time course
day0
antibody
PPARg
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Samples were treated by nuclear extraction buffer (10 mM Tris-HCl, pH 7.4, 10 mM NaCl, 3 mM MgCl2 and 0.1% IGEPAL CA-630) for 10 minutes and immediately cross-linked with 1% formaldehyde for 7.5 minutes at room temperature. Cross-linking was quenched using 125 mM glycine for 5 minutes. The chromatin was sheared by probe sonicator (Branson) and was spun at 15,000rpm for 5 minutes. Antibodies were added for overnight incubation at 4C. Mix of Protein A and Protein G Sepharose (GE) were added to samples for 4h at 4C. Subsequent procedures were performed as described previously (Waki et.al. 2011). ChIP-seq libraries were prepared using KAPA hyper prep kit (KAPA Biosystems) according to the manufacturer's instructions.