SRX187513
GSM1005194: BB STAT5A ChIP-seq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat5a

Cell type

Cell type Class
Breast
Cell type
Mammary cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mammary tissues
chip antibody
STAT5A
strain
129SV::FVB/N::C57BL/6
developmental stage
Day of parturition

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
75607760
Reads aligned (%)
97.6
Duplicates removed (%)
30.0
Number of peaks
634 (qval < 1E-05)

mm9

Number of total reads
75607760
Reads aligned (%)
97.3
Duplicates removed (%)
30.0
Number of peaks
759 (qval < 1E-05)

Base call quality data from DBCLS SRA