Curated Sample Data


Genome
dm3
Antigen Class
Histone
Antigen
H3K27me3
Cell type Class
Embryo
Cell type
16-18h embryos

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
Embryo 16h-18h
genotype
WT
tissue
Embryo
age
16-18
antibody
K27me3 Millipore

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Chromatin prepared from Drosophila embryos was immunoprecipitated with specific antibodies and precipitated DNA was isolated (see mat and methods for details) Libraries were prepared according to Illumina's instructions

Platform Information


instrument_model
Illumina HiSeq 2000

External Database Query

Logs in read processing pipeline


Number of total reads
40997558
Reads aligned (%)
88.0
Duplicates removed (%)
16.8
Number of peaks
1356 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA