SRX1858729
ChIP-Seq of Mus musculus: B lymphocyte

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

breed
Hdac7loxp/-;mb1-Creki/+
age
Missing
dev_stage
Missing
sex
male
tissue
B lymphocyte
replicate
Sample input KO biological replicate 1

Sequenced DNA Library

library_name
KO_1_INPUT_pro-B_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
29503751
Reads aligned (%)
88.5
Duplicates removed (%)
18.9
Number of peaks
486 (qval < 1E-05)

mm9

Number of total reads
29503751
Reads aligned (%)
88.3
Duplicates removed (%)
19.0
Number of peaks
510 (qval < 1E-05)

Base call quality data from DBCLS SRA