SRX1858727
ChIP-Seq of Mus musculus: B lymphocyte

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

breed
Hdac7+/-;mb1-Creki/+
age
Missing
dev_stage
Missing
sex
male
tissue
B lymphocyte
replicate
Sample WT biological replicate 1

Sequenced DNA Library

library_name
WT_1_H3Ac_pro-B_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
29019282
Reads aligned (%)
78.7
Duplicates removed (%)
31.9
Number of peaks
15890 (qval < 1E-05)

mm9

Number of total reads
29019282
Reads aligned (%)
78.6
Duplicates removed (%)
32.0
Number of peaks
15922 (qval < 1E-05)

Base call quality data from DBCLS SRA