Antigen

Antigen Class

Histone

Antigen

H3K36me3

Cell type

Cell type Class

Kidney

Cell type

Kidney

MeSH Description

Body organ that filters blood for the secretion of URINE and that regulates ion concentrations.

Sample

source_name

Kidney

biomaterial_provider

1)Stam lab ; 2)CSHL lab

lab

LICR-m

lab description

Ren - Ludwig Institue for Cancer Research

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

Kidney

cell organism

mouse

cell description

Kidney

cell sex

M

antibody

H3K36me3

antibody antibodydescription

rabbit polyclonal. Antibody Target: H3K36me3

antibody targetdescription

Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.

antibody vendorname

Abcam

antibody vendorid

ab9050

age

adult-8wks

age description

Adult 8 weeks

age

adult-8wks

age description

Adult 8 weeks

control

std

control description

Standard input signal for most experiments.

controlid

wgEncodeEM001451

labversion

Pooled & filtered

softwareversion

MACS

strain

C57BL/6

strain description

C57 black 6, the most common inbred strain of laboratory mouse

Sequenced DNA Library

library_name

GSM1000063: LICR_ChipSeq_Kidney_H3K36me3_adult-8wks

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

70297804

Reads aligned (%)

88.7

Duplicates removed (%)

24.1

Number of peaks

598 (qval < 1E-05)

mm9

Number of total reads

70297804

Reads aligned (%)

88.5

Duplicates removed (%)

24.0

Number of peaks

843 (qval < 1E-05)