SRX185779
GSM1000457: mK3 H3K27; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryonic fibroblast
Cell type
mK3
NA
NA

Attributes by original data submitter

Sample

source_name
mK3 Cells
cell line
mK3
strain
CD1
chip antibody
H3K27

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
29410627
Reads aligned (%)
98.0
Duplicates removed (%)
10.1
Number of peaks
491 (qval < 1E-05)

mm9

Number of total reads
29410627
Reads aligned (%)
97.9
Duplicates removed (%)
10.2
Number of peaks
559 (qval < 1E-05)

Base call quality data from DBCLS SRA