Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Elf1

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4 Elf1 ChIP
cell type
CD4+ Foxp3-negative T cells
cell source
Primary Mouse T cells isolated ex-vivo and sorted

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
32011534
Reads aligned (%)
59.5
Duplicates removed (%)
16.2
Number of peaks
9740 (qval < 1E-05)

mm9

Number of total reads
32011534
Reads aligned (%)
59.4
Duplicates removed (%)
16.2
Number of peaks
9777 (qval < 1E-05)

Base call quality data from DBCLS SRA