SRX183908
GSM999006: NK H3K4me1 donor C; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Blood
Cell type
CD56+
NA
NA

Attributes by original data submitter

Sample

source_name
CD56+ Natural Killer cells
cell type
CD56+ Natural Killer cells
donor
C
donor gender
male
chip antibody
H3K4me1
chip antibody manufacturer
abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
37525647
Reads aligned (%)
97.8
Duplicates removed (%)
11.9
Number of peaks
35948 (qval < 1E-05)

hg19

Number of total reads
37525647
Reads aligned (%)
97.5
Duplicates removed (%)
12.3
Number of peaks
35727 (qval < 1E-05)

Base call quality data from DBCLS SRA