SRX183882
GSM998949: Twist ChIP-Seq from 2-4 h wild type embryos, rep2; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
twi

Cell type

Cell type Class
Embryo
Cell type
2-4h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Twist ChIP-Seq from 2-4 h wild type embryos
strain
Oregon R (wild type)
tissue
whole-embryo
time point
2-4hr after egg laying (AEL)
chip antibody
Anti Twist

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
10657102
Reads aligned (%)
99.0
Duplicates removed (%)
32.9
Number of peaks
8525 (qval < 1E-05)

dm6

Number of total reads
10657102
Reads aligned (%)
98.8
Duplicates removed (%)
32.9
Number of peaks
8589 (qval < 1E-05)

Base call quality data from DBCLS SRA