SRX183787
GSM998924: nTreg Foxo1 Ab ChIPseq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Foxo1

Cell type

Cell type Class
Blood
Cell type
Treg
NA
NA

Attributes by original data submitter

Sample

source_name
nTreg cells
cell type
nTreg, Foxo1 Ab, ChIP
chip antibody
Foxo1 antibody (Abcam, Ab39670, lot#GR16346-7)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
33388850
Reads aligned (%)
55.1
Duplicates removed (%)
73.0
Number of peaks
1962 (qval < 1E-05)

mm9

Number of total reads
33388850
Reads aligned (%)
55.0
Duplicates removed (%)
73.1
Number of peaks
2016 (qval < 1E-05)

Base call quality data from DBCLS SRA