Antigen

Antigen Class

Bisulfite-Seq

Antigen

Bisulfite-Seq

Cell type

Cell type Class

Cardiovascular

Cell type

Heart

MeSH Description

The hollow, muscular organ that maintains the circulation of the blood.

Sample

tissue

heart

age

0 day

donor ID

ENCDO469XMJ

dev stage

postnatal

sample type

tissue

sex

pooled male and female

health state

healthy

lab

Len Pennacchio, LBNL

Sequenced DNA Library

library_strategy

Bisulfite-Seq

library_source

GENOMIC

library_selection

RANDOM

library_construction_protocol

document: https://www.encodeproject.org/documents/665c8f16-3724-4ab7-aa29-688f396bcd4f/@@download/attachment/Ecker_Protocol_Summary.png document: https://www.encodeproject.org/documents/862389c9-38b6-4e76-8b84-d82fb9a4c6cf/@@download/attachment/Ecker_Replication_Summary.png See ENCODE portal

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

661804193

Reads aligned (%)

82.2

Coverage rate (×)

7.7

Number of hyper MRs

250405 (qval < 1E-05)

mm9

Number of total reads

661804193

Reads aligned (%)

83.0

Coverage rate (×)

7.7

Number of hyper MRs

250055 (qval < 1E-05)