Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBX4

Cell type

Cell type Class
Blood
Cell type
Erythroblasts
MeSH Description
Immature, nucleated ERYTHROCYTES occupying the stage of ERYTHROPOIESIS that follows formation of ERYTHROID PRECURSOR CELLS and precedes formation of RETICULOCYTES. The normal series is called normoblasts. Cells called MEGALOBLASTS are a pathologic series of erythroblasts.

Attributes by original data submitter

Sample

source_name
Primary Erythroblasts derived from Adult perpheral blood CD34+ donor #3917
cell line
Primary Erythroblasts derived from Adult perpheral blood CD34+ donor #3917
cell type
Human erythroblasts
differeniation stage
Day 11
treatment
NA
chip antibody
CBX4(Proteintech #18544-1-AP)

Sequenced DNA Library

library_name
GSM6737588
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Cells were directly used in CUT&RUN or fixed with 1% formaldehyde for 10 minutes in ChIP-seq Sequencing libraries were generated using NEB kits (E7645 and E6440S)

Sequencing Platform

instrument_model
NextSeq 2000

hg38

Number of total reads
32355357
Reads aligned (%)
96.6
Duplicates removed (%)
18.4
Number of peaks
793 (qval < 1E-05)

hg19

Number of total reads
32355357
Reads aligned (%)
95.8
Duplicates removed (%)
18.8
Number of peaks
533 (qval < 1E-05)

Base call quality data from DBCLS SRA