Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Kdm1a

Cell type

Cell type Class
Blood
Cell type
Granulocytes
MeSH Description
Leukocytes with abundant granules in the cytoplasm. They are divided into three groups according to the staining properties of the granules: neutrophilic, eosinophilic, and basophilic. Mature granulocytes are the NEUTROPHILS; EOSINOPHILS; and BASOPHILS.

Attributes by original data submitter

Sample

source_name
32D granuolocytic progenitor cells (bone marrow)
cell type
32D granuolocytic progenitor cells (bone marrow)
chip antibody
Lsd1

Sequenced DNA Library

library_name
GSM994238: Lsd1_32D
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
185003345
Reads aligned (%)
94.2
Duplicates removed (%)
63.6
Number of peaks
39938 (qval < 1E-05)

mm9

Number of total reads
185003345
Reads aligned (%)
94.0
Duplicates removed (%)
63.6
Number of peaks
39818 (qval < 1E-05)

Base call quality data from DBCLS SRA