Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Prostate

Cell type

LNCAP

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

LNCaP Cell Line

cell line

LNCaP

cell cycle arrest treatment

2μg/mL aphidicolin for 15 hours, followed by washout and treatment with 50ng/mL nocodozole for 9 hours +3 hour 10nm DHT

dht treatment

+

chip antibody

none (input)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP was performed as previously described by Schmidt et al 2009 Illumina library prep kit was utilyzed according to manufacturer's instructions

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

18057300

Reads aligned (%)

89.3

Duplicates removed (%)

4.3

Number of peaks

608 (qval < 1E-05)

hg19

Number of total reads

18057300

Reads aligned (%)

88.6

Duplicates removed (%)

5.4

Number of peaks

772 (qval < 1E-05)